Publications

  1. Kim J, Mun DG, Ding H, Forsberg EM, Meyer SW, Barsch A, Pandey A, Byeon SK. Single Cell Untargeted Lipidomics Using Liquid Chromatography Ion Mobility-Mass Spectrometry. J Proteome Res. 2025 Apr 4; 24 (4):1579-1585 Epub 2025 Feb 14
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  2. Polania-Sandoval C, Byeon SK, Hartwell J, Prudencio M, Petrucelli L, Brigham T, Meschia JF, Pandey A, Erben Y. Lipidomic Expression Analysis in Carotid Atherosclerotic Disease: A Systematic Review. Ann Vasc Surg. 2025 Apr; 113:83-94 Epub 2025 Jan 22
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  3. Devasahayam Arokia Balaya R, Sen P, Grant CW, Zenka R, Sappani M, Lakshmanan J, Athreya AP, Kandasamy RK, Pandey A, Byeon SK. An integrative multi-omics analysis reveals a multi-analyte signature of pancreatic ductal adenocarcinoma in serum. J Gastroenterol. 2025 Apr; 60 (4):496-511 Epub 2024 Dec 12
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  4. Mohammed Ismail W, Fernandez JA, Binder M, Lasho TL, Kim M, Geyer SM, Mazzone A, Finke CM, Mangaonkar AA, Lee JH, Wang L, Kim KH, Simon VA, Rakhshan Rohakthar F, Munankarmy A, Byeon SK, Schwager SM, Harrington JJ, Snyder MR, Robertson KD, Pandey A, Wieben ED, Chia N, Gaspar-Maia A, Patnaik MM. Single-cell multiomics reveal divergent effects of DNMT3A- and TET2-mutant clonal hematopoiesis in inflammatory response. Blood Adv. 2025 Jan 28; 9 (2):402-416
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  5. Byeon SK, Kim J, Wegwerth PJ, Zenka R, George JP, Pinto E Vairo F, Oglesbee D, Schultz MJ, Matern D, Pandey A. Development of a Multiplexed Sphingolipids Method for Diagnosis of Inborn Errors of Ceramide Metabolism. Clin Chem. 2024 Nov 04; 70(11):1366-1374.
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  6. Kim J, Byeon SK, Oglesbee D, Schultz MJ, Matern D, Pandey A. A multiplexed targeted method for profiling of serum gangliosides and glycosphingolipids: application to GM2-gangliosidosis. Anal Bioanal Chem. 2024 Nov; 416(26):5689-5699. Epub 2024 Aug 27.
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  7. Jackson LE, Tomlinson JL, Alva-Ruiz R, Gregory LA, Byeon SK, Abdelrahman AM, Mun DG, Grant CW, Fogarty ZC, Wang C, Roberts LR, Graham RP, Borad MJ, Ilyas SI, Gores GJ, Pandey A, Athreya AP, Smoot RL. Metabolome-wide association identifies altered metabolites and metabolic pathways in the serum of patients with cholangiocarcinoma. JHEP Rep. 2024 Jun; 6 (6):101068 Epub 2024 Mar 18
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  8. Worley G, Byeon SK, Smith PB, Hart SJ, Young SP, Pandey A, Kishnani PS. An exploratory study of plasma ceramides in comorbidities in Down syndrome. Am J Med Genet A. 2023 Sep; 191(9):2300-2311. Epub 2023 Jun 21.
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  9. Dutta D, Kanca O, Byeon SK, Marcogliese PC, Zuo Z, Shridharan RV, Park JH, Lin G, Ge M, Heimer G, Kohler JN, Wheeler MT, Kaipparettu BA, Pandey A, Bellen HJ, Undiagnosed Diseases Network. A defect in mitochondrial fatty acid synthesis impairs iron metabolism and causes elevated ceramide levels. Nat Metab. 2023 Sep; 5 (9):1595-1614 Epub 2023 Aug 31
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  10. Jung JH, Yang DQ, Song H, Wang X, Wu X, Kim KP, Pandey A, Byeon SK. Characterization of Lipid Alterations by Oncogenic PIK3CA Mutations Using Untargeted Lipidomics in Breast Cancer. OMICS. 2023 Jul; 27 (7):327-335
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  11. Lin G, Tepe B, McGrane G, Tipon RC, Croft G, Panwala L, Hope A, Liang AJH, Zuo Z, Byeon SK, Wang L, Pandey A, Bellen HJ. Exploring therapeutic strategies for infantile neuronal axonal dystrophy (INAD/PARK14). Elife. 2023 Jan 16; 12
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  12. Muylle E, Jiang H, Johnsen C, Byeon SK, Ranatunga W, Garapati K, Zenka RM, Preston G, Pandey A, Kozicz T, Fang F, Morava E. TRIT1 defect leads to a recognizable phenotype of myoclonic epilepsy, speech delay, strabismus, progressive spasticity, and normal lactate levels. J Inherit Metab Dis. 2022 Nov; 45(6):1039-1047. Epub 2022 Sep 21.
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  13. Byeon SK, Madugundu AK, Garapati K, Ramarajan MG, Saraswat M, Kumar-M P, Hughes T, Shah R, Patnaik MM, Chia N, Ashrafzadeh-Kian S, Yao JD, Pritt BS, Cattaneo R, Salama ME, Zenka RM, Kipp BR, Grebe SKG, Singh RJ, Sadighi Akha AA, Algeciras-Schimnich A, Dasari S, Olson JE, Walsh JR, Venkatakrishnan AJ, Jenkinson G, O'Horo JC, Badley AD, Pandey A. Development of a multiomics model for identification of predictive biomarkers for COVID-19 severity: a retrospective cohort study. Lancet Digit Health. 2022 Sep; 4(9):e632-e645. Epub 2022 Jul 11.
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  14. Wang L, Lin G, Zuo Z, Li Y, Byeon SK, Pandey A, Bellen HJ. Neuronal activity induces glucosylceramide that is secreted via exosomes for lysosomal degradation in glia. Sci Adv. 2022 Jul 15; 8(28):eabn3326. Epub 2022 Jul 13.
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  15. Byeon SK, Khanam R, Rahman S, Hasan T, Rizvi SJR, Madugundu AK, Ramarajan MG, Jung JH, Chowdhury NH, Ahmed S, Raqib R, Kim KP, Piazza AL, Rinaldo P, Pandey A, Baqui AH, Amanhi Bio-Banking Study Group. Maternal serum lipidomics identifies lysophosphatidic acid as a predictor of small for gestational age neonates. Mol Omics. 2021 Dec 06; 17(6):956-966.
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  16. Byeon SK, Madugundu AK, Pandey A. Automated data-driven mass spectrometry for improved analysis of lipids with dual dissociation techniques. J Mass Spectrom Adv Clin Lab. 2021 Nov; 22:43-49 Epub 2021 Oct 28
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  17. Byeon SK, Ramarajan MG, Madugundu AK, Oglesbee D, Vernon HJ, Pandey A. High-resolution mass spectrometric analysis of cardiolipin profiles in Barth syndrome. Mitochondrion. 2021 Sep; 60:27-32 Epub 2021 July 15
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  18. Byeon SK, Madugundu AK, Jain AP, Bhat FA, Jung JH, Renuse S, Darrow J, Bakker A, Albert M, Moghekar A, Pandey A. Cerebrospinal fluid lipidomics for biomarkers of Alzheimer's disease. Mol Omics. 2021 Jun 14; 17 (3):454-463
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  19. Radenkovic S, Fitzpatrick-Schmidt T, Byeon SK, Madugundu AK, Saraswat M, Lichty A, Wong SYW, McGee S, Kubiak K, Ligezka A, Ranatunga W, Zhang Y, Wood T, Friez MJ, Clarkson K, Pandey A, Jones JR, Morava E. Expanding the clinical and metabolic phenotype of DPM2 deficient congenital disorders of glycosylation. Mol Genet Metab. 2021 Jan; 132 (1):27-37 Epub 2020 Oct 17
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  20. Renuse S, Madugundu AK, Jung JH, Byeon SK, Goldschmidt HL, Tahir R, Meyers D, Kim DI, Cutler J, Kim KP, Wu X, Huganir RL, Pandey A. Signature Fragment Ions of Biotinylated Peptides. J Am Soc Mass Spectrom. 2020 Feb 5; 31 (2):394-404 Epub 2020 Jan 13
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  21. Byeon SK, Park SH, Lee JC, Hwang S, Ku CR, Shin DY, Yoon JS, Lee EJ, Moon MH. Lipidomic differentiation of Graves' ophthalmopathy in plasma and urine from Graves' disease patients. Anal Bioanal Chem. 2018 Nov; 410 (27):7121-7133 Epub 2018 Aug 22
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  22. Park SM, Byeon SK, Lee H, Sung H, Kim IY, Seong JK, Moon MH. Lipidomic analysis of skeletal muscle tissues of p53 knockout mice by nUPLC-ESI-MS/MS. Sci Rep. 2017 Jun 12; 7 (1):3302 Epub 2017 June 12
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  23. Lee JC, Byeon SK, Moon MH. Relative Quantification of Phospholipids Based on Isotope-Labeled Methylation by Nanoflow Ultrahigh Performance Liquid Chromatography-Tandem Mass Spectrometry: Enhancement in Cardiolipin Profiling. Anal Chem. 2017 May 2; 89 (9):4969-4977 Epub 2017 Apr 21
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  24. Yang JS, Lee JC, Byeon SK, Rha KH, Moon MH. Size Dependent Lipidomic Analysis of Urinary Exosomes from Patients with Prostate Cancer by Flow Field-Flow Fractionation and Nanoflow Liquid Chromatography-Tandem Mass Spectrometry. Anal Chem. 2017 Feb 21; 89 (4):2488-2496 Epub 2017 Feb 02
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  25. Park SM, Byeon SK, Sung H, Cho SY, Seong JK, Moon MH. Lipidomic Perturbations in Lung, Kidney, and Liver Tissues of p53 Knockout Mice Analyzed by Nanoflow UPLC-ESI-MS/MS. J Proteome Res. 2016 Oct 7; 15 (10):3763-3772 Epub 2016 Sept 14
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  26. Lee JY, Yang JS, Park SM, Byeon SK, Moon MH. On-line high speed lipid extraction for nanoflow liquid chromatography-tandem mass spectrometry. J Chromatogr A. 2016 Sep 16; 1464:12-20 Epub 2016 Aug 10
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  27. Lee JC, Kim IY, Son Y, Byeon SK, Yoon DH, Son JS, Song HS, Song W, Seong JK, Moon MH. Evaluation of treadmill exercise effect on muscular lipid profiles of diabetic fatty rats by nanoflow liquid chromatography-tandem mass spectrometry. Sci Rep. 2016 Jul 8; 6:29617 Epub 2016 July 08
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  28. Byeon SK, Lee JC, Chung BC, Seo HS, Moon MH. High-throughput and rapid quantification of lipids by nanoflow UPLC-ESI-MS/MS: application to the hepatic lipids of rabbits with nonalcoholic fatty liver disease. Anal Bioanal Chem. 2016 Jul; 408 (18):4975-85 Epub 2016 May 13
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  29. Byeon SK, Kim JY, Lee JS, Moon MH. Variations in plasma and urinary lipids in response to enzyme replacement therapy for Fabry disease patients by nanoflow UPLC-ESI-MS/MS. Anal Bioanal Chem. 2016 Mar; 408 (9):2265-74 Epub 2016 Feb 12
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  30. Tan ZQ, Liu JF, Guo XR, Yin YG, Byeon SK, Moon MH, Jiang GB. Toward full spectrum speciation of silver nanoparticles and ionic silver by on-line coupling of hollow fiber flow field-flow fractionation and minicolumn concentration with multiple detectors. Anal Chem. 2015 Aug 18; 87 (16):8441-7 Epub 2015 Aug 07
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  31. Byeon SK, Kim JY, Lee JY, Chung BC, Seo HS, Moon MH. Top-down and bottom-up lipidomic analysis of rabbit lipoproteins under different metabolic conditions using flow field-flow fractionation, nanoflow liquid chromatography and mass spectrometry. J Chromatogr A. 2015 Jul 31; 1405:140-8 Epub 2015 June 04
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  32. Byeon SK, Lee JY, Lee JS, Moon MH. Lipidomic profiling of plasma and urine from patients with Gaucher disease during enzyme replacement therapy by nanoflow liquid chromatography-tandem mass spectrometry. J Chromatogr A. 2015 Feb 13; 1381:132-9 Epub 2015 Jan 10
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  33. Lee JY, Byeon SK, Moon MH. Profiling of oxidized phospholipids in lipoproteins from patients with coronary artery disease by hollow fiber flow field-flow fractionation and nanoflow liquid chromatography-tandem mass spectrometry. Anal Chem. 2015 Jan 20; 87 (2):1266-73 Epub 2014 Dec 23
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  34. Bang DY, Byeon SK, Moon MH. Rapid and simple extraction of lipids from blood plasma and urine for liquid chromatography-tandem mass spectrometry. J Chromatogr A. 2014 Feb 28; 1331:19-26 Epub 2014 Jan 17
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  35. Byeon SK, Lee JY, Lim S, Choi D, Moon MH. Discovery of candidate phospholipid biomarkers in human lipoproteins with coronary artery disease by flow field-flow fractionation and nanoflow liquid chromatography-tandem mass spectrometry. J Chromatogr A. 2012 Dec 28; 1270:246-53 Epub 2012 Nov 12
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  36. Lim S, Byeon SK, Lee JY, Moon MH. Computational approach to structural identification of phospholipids using raw mass spectra from nanoflow liquid chromatography-electrospray ionization-tandem mass spectrometry. J Mass Spectrom. 2012 Aug; 47 (8):1004-14
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  37. Byeon SK, Lee JY, Moon MH. Optimized extraction of phospholipids and lysophospholipids for nanoflow liquid chromatography-electrospray ionization-tandem mass spectrometry. Analyst. 2012 Jan 21; 137 (2):451-8 Epub 2011 Nov 23
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