Publications

  1. Fletcher JG, Levin DL, Sykes AG, Lindell RM, White DB, Kuzo RS, Suresh V, Yu L, Leng S, Holmes DR 3rd, Inoue A, Johnson MP, Carter RE, McCollough CH. Observer Performance for Detection of Pulmonary Nodules at Chest CT over a Large Range of Radiation Dose Levels. Radiology. 2020 Sep 29; 200969 Epub 2020 Sept 29
    View PubMed
  2. Carter RE, Holmes DR 3rd, Fletcher JG, McCollough CH. Evaluation of Pseudoreader Study Designs to Estimate Observer Performance Results as an Alternative to Fully Crossed, Multireader, Multicase Studies. Acad Radiol. 2020 Feb; 27 (2):244-252 Epub 2019 May 07
    View PubMed
  3. Mohammadinejad P, Ehman EC, Vasconcelos RN, Venkatesh SK, Hough DM, Lowe R, Lee YS, Nehra A, Dirks S, Holmes DR 3rd, Carter RE, Schmidt B, Halaweish AF, McCollough CH, Fletcher JG. Prior iterative reconstruction (PIR) to lower radiation dose and preserve radiologist performance for multiphase liver CT: a multi-reader pilot study. Abdom Radiol (NY). 2020 Jan; 45 (1):45-54
    View PubMed
  4. Kakar S, Greene RM, Elhassan BT, Holmes DR 3rd. Topographical Analysis of the Hamate for Proximal Pole Scaphoid Nonunion Reconstruction. J Hand Surg Am. 2020 Jan; 45 (1):69.e1-69.e7 Epub 2019 July 09
    View PubMed
  5. Mozingo JD, Akbari-Shandiz M, Murthy NS, Van Straaten MG, Schueler BA, Holmes DR 3rd, McCollough CH, Zhao KD. Shoulder mechanical impingement risk associated with manual wheelchair tasks in individuals with spinal cord injury. Clin Biomech (Bristol, Avon). 2020 Jan; 71:221-229 Epub 2019 Oct 20
    View PubMed
  6. Mozingo JD, Akbari-Shandiz M, Van Straaten MG, Murthy NS, Schueler BA, Holmes DR 3rd, McCollough CH, Zhao KD. Comparison of glenohumeral joint kinematics between manual wheelchair tasks and implications on the subacromial space: A biplane fluoroscopy study. J Electromyogr Kinesiol. 2019 Aug 23; 102350 [Epub ahead of print]
    View PubMed
  7. Puthanmadhom Narayanan S, Sharma M, Fletcher JG, Karwoski RA, Holmes DR 3rd, Bharucha AE. Comparison of changes in rectal area and volume during MR evacuation proctography in healthy and constipated adults. Neurogastroenterol Motil. 2019 Jul; 31 (7):e13608 Epub 2019 Apr 26
    View PubMed
  8. Fletcher JG, Fidler JL, Venkatesh SK, Hough DM, Takahashi N, Yu L, Johnson M, Leng S, Holmes DR 3rd, Carter R, McCollough CH. Observer Performance with Varying Radiation Dose and Reconstruction Methods for Detection of Hepatic Metastases. Radiology. 2018 Nov; 289 (2):455-464 Epub 2018 Sept 11
    View PubMed
  9. Akbari-Shandiz M, Mozingo JD, Holmes Iii DR, Zhao KD, Holmes Iii DR. An interpolation technique to enable accurate three-dimensional joint kinematic analyses using asynchronous biplane fluoroscopy. Med Eng Phys. 2018 Oct; 60:109-116 Epub 2018 Aug 08
    View PubMed
  10. Long Z, Hanson DP, Mullan BP, Hunt CH, Holmes DR 3rd, Brinkmann BH, O'Connor MK. Analysis of Brain SPECT Images Coregistered with MRI in Patients with Epilepsy: Comparison of Three Methods. J Neuroimaging. 2018 May; 28 (3):307-312 Epub 2018 Jan 10
    View PubMed
  11. Mozingo JD, Akbari Shandiz M, Marquez FM, Schueler BA, Holmes DR 3rd, McCollough CH, Zhao KD. Validation of imaging-based quantification of glenohumeral joint kinematics using an unmodified clinical biplane fluoroscopy system. J Biomech. 2018 Apr 11; 71:306-312 Epub 2018 Feb 13
    View PubMed
  12. Linte CA, Camp JJ, Rettmann ME, Haemmerich D, Aktas MK, Huang DT, Packer DL, Holmes DR 3rd. Lesion modeling, characterization, and visualization for image-guided cardiac ablation therapy monitoring. J Med Imaging (Bellingham). 2018 Apr; 5 (2):021218 Epub 2018 Mar 01
    View PubMed
  13. Pinto SC, Felton CL, Smital L, Haider CR. Clinical accuracy QRS detector with automatic parameter adjustment in an autonomous, real-time physiologic monitor 2017 IEEE Global Conference on Signal and Information Processing (GlobalSIP). 2018; 1005-1009.
  14. Linte CA, Camp JJ, Rettmann ME, Haemmerich D, Aktas MK, Huang DT, Packer DL, Holmes DR 3rd. Technical Note: On Cardiac Ablation Lesion Visualization for Image-guided Therapy Monitoring. Proc SPIE Int Soc Opt Eng. 2018 Feb; 10576 Epub 2018 Mar 13
    View PubMed
  15. McCollough CH, Bartley AC, Carter RE, Chen B, Drees TA, Edwards P, Holmes DR 3rd, Huang AE, Khan F, Leng S, McMillan KL, Michalak GJ, Nunez KM, Yu L, Fletcher JG. Low-dose CT for the detection and classification of metastatic liver lesions: Results of the 2016 Low Dose CT Grand Challenge. Med Phys. 2017 Oct; 44 (10):e339-e352
    View PubMed
  16. Wells ML, Froemming AT, Kawashima A, Vrtiska TJ, Kim B, Hartman RP, Holmes DR 3rd, Carter RE, Bartley AC, Leng S, McCollough CH, Fletcher JG. A multi-reader in vitro study using porcine kidneys to determine the impact of integrated circuit detectors and iterative reconstruction on the detection accuracy, size measurement, and radiation dose for small (<4 mm) renal stones. Acta Radiol. 2017 Aug; 58: (8)1012-1019.
    View PubMed
  17. Fletcher JG, Yu L, Fidler JL, Levin DL, DeLone DR, Hough DM, Takahashi N, Venkatesh SK, Sykes AG, White D, Lindell RM, Kotsenas AL, Campeau NG, Lehman VT, Bartley AC, Leng S, Holmes DR 3rd, Toledano AY, Carter RE, McCollough CH. Estimation of Observer Performance for Reduced Radiation Dose Levels in CT: Eliminating Reduced Dose Levels That Are Too Low Is the First Step. Acad Radiol. 2017 Jul; 24 (7):876-890 Epub 2017 Mar 02
    View PubMed
  18. Go RS, Bartley AC, Crowson CS, Shah ND, Habermann EB, Holton SJ, Holmes DR 3rd. Association Between Treatment Facility Volume and Mortality of Patients With Multiple Myeloma. J Clin Oncol. 2017 Feb 20; 35: (6)598-604.
    View PubMed
  19. Rivera M, Cockerill PA, Enders F, Mehta RA, Vaughan L, Vrtiska TJ, Herrera Hernandez LP, Holmes DR 3rd, Rule AD, Lieske JC, Krambeck AE. Characterization of Inner Medullary Collecting Duct Plug Formation Among Idiopathic Calcium Oxalate Stone Formers. Urology. 2016 Aug; 94:47-52 Epub 2016 May 19
    View PubMed
  20. Jaeger CD, Rule AD, Mehta RA, Vaughan LE, Vrtiska TJ, Holmes DR 3rd, McCollough CM, Ziegelmann MJ, Herrera Hernandez LP, Lieske JC, Krambeck AE. Endoscopic and Pathologic Characterization of Papillary Architecture in Struvite Stone Formers. Urology. 2016 Apr; 90:39-44 Epub 2016 Jan 06
    View PubMed
  21. Breighner R, Holmes DR 3rd, Leng S, An KN, McCollough C, Zhao K. Relative accuracy of spin-image-based registration of partial capitate bones in 4DCT of the wrist. Comput Methods Biomech Biomed Eng Imaging Vis. 2016; 4 (6):360-367 Epub 2014 Aug 12
    View PubMed
  22. Holmes D, Brinkmann B, Hanson D, Worrell G, Robb R, Holton L. Feasibility of tracked electrodes for use in epilepsy surgery Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 2016; 9786:97862M.
  23. Camp JJ, Hanson DP, Lowe VJ, Kemp BJ, Senjem ML, Murray ME, Dickson DW, Parisi JE, Petersen RC, Robb RA, Holmes DR III. Quantitative characterization of brain beta-amyloid in 718 normal subjects using a joint PiB/FDG PET image histogram Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 2016; 9785:97852V.
  24. Wells ML, Froemming AT, Kawashima A, Vrtiska TJ, Kim B, Hartman RP, Holmes III DR, Carter RE, Bartley AC, Leng S, McCollough CH, Fletcher JG. A multi-reader in vitro study using porcine kidneys to determine the impact of integrated circuit detectors and iterative reconstruction on the detection accuracy, size measurement, and radiation dose for small (<4mm) renal stones Acta Radiologica.2016;0:(0)1-8.
  25. Smital L, Haider C, Leinveber P, Jurak P, Gilbert B, Holmes D. Towards real-time QRS feature extraction for wearable monitors Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS. 2016; 2016-October:3519-22. Epub 1900 Jan 01.
  26. Techentin RW, Markland MW, Poole RJ, Haider CR. Page Rank Performance Evaluation of Cluster Computing Frameworks on Cray Urika-GX Supercomputer Computer Science and Engineering. 2016; 6(2):33-38.
  27. Fletcher JG, Yu L, Li Z, Manduca A, Blezek DJ, Hough DM, Venkatesh SK, Brickner GC, Cernigliaro JC, Hara AK, Fidler JL, Lake DS, Shiung M, Lewis D, Leng S, Augustine KE, Carter RE, Holmes DR 3rd, McCollough CH. Observer Performance in the Detection and Classification of Malignant Hepatic Nodules and Masses with CT Image-Space Denoising and Iterative Reconstruction. Radiology. 2015 Aug; 276 (2):465-78 Epub 2015 May 26
    View PubMed
  28. Zhao K, Breighner R, Holmes D III, Leng S, McCollough C, An KN. A technique for quantifying wrist motion using four-dimensional computed tomography: approach and validation. Journal Of Biomechanical Engineering-Transactions Of The Asme. 2015 Jul; 137(7):074501.
  29. Fletcher JG, Hara AK, Fidler JL, Silva AC, Barlow JM, Carter RE, Bartley A, Shiung M, Holmes DR 3rd, Weber NK, Bruining DH, Yu L, McCollough CH. Observer performance for adaptive, image-based denoising and filtered back projection compared to scanner-based iterative reconstruction for lower dose CT enterography. Abdom Imaging. 2015 Jun; 40 (5):1050-9
    View PubMed
  30. Viers BR, Lieske JC, Vrtiska TJ, Herrera Hernandez LP, Vaughan LE, Mehta RA, Bergstralh EJ, Rule AD, Holmes DR 3rd, Krambeck AE. Endoscopic and histologic findings in a cohort of uric acid and calcium oxalate stone formers. Urology. 2015 Apr; 85 (4):771-6 Epub 2015 Feb 11
    View PubMed
  31. Sun D, Rettmann ME, Packer D, Robb RA, Holmes DR 3rd. Simulated evaluation of an intraoperative surface modeling method for catheter ablation by a real phantom simulation experiment. Proc SPIE Int Soc Opt Eng. 2015 Feb 21; 9415
    View PubMed
  32. Rettmann ME, Holmes DR 3rd, Johnson SB, Lehmann HI, Robb RA, Packer DL. Analysis of Left Atrial Respiratory and Cardiac Motion for Cardiac Ablation Therapy. Proc SPIE Int Soc Opt Eng. 2015 Feb 21; 9415
    View PubMed
  33. Camp JJ, Linte CA, Rettmann ME, Sun D, Packer DL, Robb RA, Holmes DR 3rd. The effect of elastic modulus on ablation catheter contact area. Proc SPIE Int Soc Opt Eng. 2015 Feb 21; 9415 Epub 2015 Mar 18
    View PubMed
  34. Rettmann ME, Holmes DR 3rd, Breen JF, Ge X, Karwoski RA, Monahan KH, Bahnson TD, Packer DL, Robb RA, CABANA Pilot Imaging Investigators. Measurements of the left atrium and pulmonary veins for analysis of reverse structural remodeling following cardiac ablation therapy. Comput Methods Programs Biomed. 2015 Feb; 118 (2):198-206 Epub 2014 Nov 13
    View PubMed
  35. Jameson JR, Holmes DR III, Buhrow BR, Daniel ES, Gilbert BK, Haider CR. Simulated imaging of atherosclerotic & radiofrequency ablation lesions using phase subtraction Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS. 2015; 2015-November:5630-3. Epub 1900 Jan 01.
  36. Linte CA, Camp JJ, Augustine KE, Huddleston PM, Robb RA, Holmes DR III. Estimating pedicle screw fastening strength via a virtual templating platform for spine surgery planning: a retrospective preliminary clinical demonstration Computer Methods in Biomechanics and Biomedical Engineering: Imaging and Visualization. 2015; 3: (4)204-12.
  37. Linte CA, Augustine KE, Camp JJ, Robb RA, Holmes DR. Toward virtual modeling and templating for enhanced spine surgery planning Springer: Spinal Imaging and Image Analysis.2015;441-467.
  38. Wang X, Krambeck AE, Williams JC Jr, Tang X, Rule AD, Zhao F, Bergstralh E, Haskic Z, Edeh S, Holmes DR 3rd, Herrera Hernandez LP, Lieske JC. Distinguishing characteristics of idiopathic calcium oxalate kidney stone formers with low amounts of Randall's plaque. Clin J Am Soc Nephrol. 2014 Oct 7; 9 (10):1757-63 Epub 2014 Aug 04
    View PubMed
  39. Bharucha AE, Karwoski RA, Fidler J, Holmes DR 3rd, Robb RA, Riederer SJ, Zinsmeister AR. Comparison of manual and semiautomated techniques for analyzing gastric volumes with MRI in humans. Am J Physiol Gastrointest Liver Physiol. 2014 Sep 1; 307 (5):G582-7 Epub 2014 July 10
    View PubMed
  40. Holmes DR 3rd, Davis BJ, Goulet CC, Wilson TM, Mynderse LA, Furutani KM, Camp JJ, Robb RA. Shape analysis of the prostate: establishing imaging specifications for the design of a transurethral imaging device for prostate brachytherapy guidance. Brachytherapy. 2014 Sep-Oct; 13 (5):465-70 Epub 2014 June 21
    View PubMed
  41. Davis BJ, Leenstra JL, Wilson TM, Mynderse LA, Solhjem MC, Herman MG, Hillman DW, Allen-Ziegler KL, Cheville JC, King BF, Holmes III DR. Prostate Volume in Patients Undergoing Primary Surgical or Radiotherapeutic Management of Localized Adenocarcinoma: Implications for Design of Minimally Invasive Imaging and Treatment Devices for the Prostate. OMICS J Radiol S1. June 6, 2014(S1).
  42. Sulc V, Stykel S, Hanson DP, Brinkmann BH, Jones DT, Holmes DR 3rd, Robb RA, Senjem ML, Mullan BP, Watson RE Jr, Horinek D, Cascino GD, Wong-Kisiel LC, Britton JW, So EL, Worrell GA. Statistical SPECT processing in MRI-negative epilepsy surgery. Neurology. 2014 Mar 18; 82 (11):932-9 Epub 2014 Feb 14
    View PubMed
  43. Rettmann ME, Holmes DR 3rd, Kwartowitz DM, Gunawan M, Johnson SB, Camp JJ, Cameron BM, Dalegrave C, Kolasa MW, Packer DL, Robb RA. Quantitative modeling of the accuracy in registering preoperative patient-specific anatomic models into left atrial cardiac ablation procedures. Med Phys. 2014 Feb; 41 (2):021909
    View PubMed
  44. Linte CA, Camp JJ, Augustine K, Holmes III DR, Robb RA. Virtual platform for spine surgery planning: Initial assessment and clinical experience. Journal of Computer Methods Biomech Biomed Engin: Imaging & Visualization (In Press - Feb, 2014)..2014;().
  45. Techentin R, Foti D, Li P, Daniel E, Gilbert B, Holmes D, Al-Saffar S. Development of a semi-synthetic dataset as a testbed for big-data semantic analytics. Proceedings - 2014 IEEE International Conference on Semantic Computing, ICSC 2014. 2014; (2):252-3.
  46. Sun D, Rettmann ME, Holmes DR III, Linte CA, Packer D, Robb RA. Updating a preoperative surface model with information from real-time tracked 2D ultrasound using a Poisson surface reconstruction algorithm. Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 2014; 9036:90361T.
  47. Linte CA, Camp JJ, Augustine KE, Huddleston PM, Robb RA, Holmes DR III. Virtual estimates of fastening strength for pedicle screw implantation procedures. Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 2014; 9036:903617.
  48. Rettmann ME, Holmes DR III, Linte CA, Packer DL, Robb RA. Toward standardized mapping for left atrial analysis and cardiac ablation guidance. Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 2014; 9036:90361K.
  49. Camp JJ, Hanson DP, Holmes DR, Kemp BJ, Senjem ML, Murray ME, Dickson DW, Parisi JE, Petersen RC, Lowe VJ, Robb RA. Quantitative characterization of brain beta-amyloid using a joint PiB/FDG PET image histogram. Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 2014; 9035:90352A.
  50. Sun D, Rettmann ME, Holmes Iii DR, Linte C, Cameron B, Liu J, Packer D, Robb RA. Anatomic surface reconstruction from sampled point cloud data and prior models. Stud Health Technol Inform. 2014; 196:387-93
    View PubMed
  51. Techentin R, Foti D, Al-Saffar S, Li P, Daniel E, Gilbert B, Holmes D. Characterization of semi-synthetic dataset for big-data semantic analysis. 2014 IEEE High Performance Extreme Computing Conference, HPEC 2014. 2014; 7040994.
  52. Linte CA, Camp JJ, Augustine K, Huddleston PM, Stans AA, Holmes DR, Robb RA. Formulating a pedicle screw fastening strength surrogate via Patient-Specific virtual templating and planning In Bio-Imaging and Visualization for Patient-Customized Simulations. Lecture Notes in Computations Vision and Biomechanics.2014;13()127-137.
  53. Pallanch JF, Yu L, Delone D, Robb R, Holmes DR 3rd, Camp J, Edwards P, McCollough CH, Ponikau J, Dearking AC, Lane J, Primak A, Shinkle A, Hagan J, Frigas E, Ocel JJ, Tombers N, Siwani R, Orme NM, Reed KB, Jerath N, Dhillon R, Kita H. Three-dimensional volumetric computed tomographic scoring as an objective outcome measure for chronic rhinosinusitis: clinical correlations and comparison to Lund-Mackay scoring. Int Forum Allergy Rhinol. 2013 Dec; 3 (12):963-72 Epub 2013 Sept 17
    View PubMed
  54. Krambeck AE, Lieske JC, Li X, Bergstralh EJ, Rule AD, Holmes D 3rd, McCollough CM, Vrtiska TJ. Current computed tomography techniques can detect duct of Bellini plugging but not Randall's plaques. Urology. 2013 Aug; 82 (2):301-6 Epub 2013 June 20
    View PubMed
  55. Linte CA, Davenport KP, Cleary K, Peters C, Vosburgh KG, Navab N, Edwards PE, Jannin P, Peters TM, Holmes DR 3rd, Robb RA. On mixed reality environments for minimally invasive therapy guidance: systems architecture, successes and challenges in their implementation from laboratory to clinic. Comput Med Imaging Graph. 2013 Mar; 37 (2):83-97 Epub 2013 Feb 08
    View PubMed
  56. Linte CA, Camp JJ, Rettmann ME, Holmes DR 3rd, Robb RA. Image-based Modeling and Characterization of RF Ablation Lesions in Cardiac Arrhythmia Therapy. Proc SPIE Int Soc Opt Eng. 2013 Feb 9; 8671
    View PubMed
  57. Linte CA, Chen ECS, Berger MO, Moore JT, Holmes DR III. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics): Preface. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 2013; 7815 LNCS:V-VII.
  58. Linte CA, Camp JJ, Holmes DR III, Rettmann ME, Robb RA. Modeling of radiofrequency ablation lesions for image-guided arrhythmia Augmented Environments for Computer-Assisted Interventions, Lecture Notes in Computer Science.2013;7815:22-33.
  59. Linte CA, Camp JJ, Holmes DR III, Rettmann ME, Robb RA. Modeling of radio-frequency ablation lesions for image-guided left atrial arrhythmia therapy: an ex vivo demonstration and validation study Annals Biomed Eng. 2013 Jan.
  60. Rettmann ME, Stephens T, Holmes DR III, Linte C, Packer DL, Robb RA. Segmentation of left atrial intracardiac ultrasound images for image guided cardiac ablation therapy. Proceedings of SPIE - The International Society for Optical Engineering. 2013; 8671:86712D.
  61. Linte CA, Camp JJ, Holmes DR 3rd, Rettmann ME, Packer DL, Robb RA. Toward modeling of radio-frequency ablation lesions for image-guided left atrial fibrillation therapy: model formulation and preliminary evaluation. Stud Health Technol Inform. 2013; 184:261-7
    View PubMed
  62. Linte CA, Camp JJ, Holmes DR 3rd, Rettmann ME, Robb RA. Toward online modeling for lesion visualization and monitoring in cardiac ablation therapy. Med Image Comput Comput Assist Interv. 2013; 16 (Pt 1):9-17
    View PubMed
  63. Sul V, Stykel S, Hanson D, Brinkmann B, Jones D, Holmes D, Robb R, Senjem ML, Larson AG, Mullan BP, Hornick D, Cascino GD, Britton J, Wong-Kisiel L, So EL, Worrell GA. Population Statistics-Based SPECT Analysis in Nonlesional Extratemporal Lobe Epilepsy Neurology.2013;80:(7):S28-004.
  64. Rettmann ME, Gunawan MS, Holmes DR 3rd, Breen JF, Packer DL, Robb RA, CABANA Pilot Imaging Investigators. Centerline tracking for quantification of reverse structural remodeling of the pulmonary veins following cardiac ablation therapy. Acad Radiol. 2012 Nov; 19 (11):1332-44 Epub 2012 Aug 11
    View PubMed
  65. Linte CA, Camp JJ, Holmes DR III, Rettmann ME, Robb RA. Modeling of radiofrequency ablation lesions for image-guided left atrial ablation therapy: an ex vivo evalution study Proc MICCAI Workshop - Augmented Enviroments for Computer-Assisted Interventions.2012;()32-41.
  66. Hogan MC, Masyuk TV, Page L, Holmes DR 3rd, Li X, Bergstralh EJ, Irazabal MV, Kim B, King BF, Glockner JF, Larusso NF, Torres VE. Somatostatin analog therapy for severe polycystic liver disease: results after 2 years. Nephrol Dial Transplant. 2012 Sep; 27 (9):3532-9 Epub 2012 July 06
    View PubMed
  67. Miyabara Y, Holmes D 3rd, Camp J, Miller VM, Kearns AE. Comparison of calibrated and uncalibrated bone mineral density by CT to DEXA in menopausal women. Climacteric. 2012 Aug; 15 (4):374-81 Epub 2011 Dec 17
    View PubMed
  68. Wilson TM, Holmes DR, Frank I, Mynderse LA, Garbini L, Curley MG, Robb RA, Davis BJ. Trans-urethral doppler ultrasound imaging during permanent brachytherapy and robotic prostatectomy Journal of Endourology.2012;26(S(1))A412.
  69. Linte CA, Rettmann ME, Dilger B, Gunawan MS, Arunachalam SP, Holmes DR 3rd, Packer DL, Robb RA. Calibration and Evaluation of a Magnetically Tracked ICE Probe for Guidance of Left Atrial Ablation Therapy. Proc SPIE Int Soc Opt Eng. 2012 Feb 4; 8316
    View PubMed
  70. Augustine Augustin KE, Camp JJ, Holmes DR, Huddleston PM, Lu L, Yaszemski MJ, Robb RA. Fracture risk assessment: improved evaluation of vertebral integrity among metastatic cancer patients to aid in surgical decision-making Proc SPIE Medical Imaging 2012: Biomedical Applications in Molecular, Structural, and Functional Imaging.2012;8317:(1A)
  71. Ehman EC, Guimaraes LS, Fidler JL, Takahashi N, Ramirez-Giraldo JC, Yu L, Manduca A, Huprich JE, McCollough CH, Holmes D 3rd, Harmsen WS, Fletcher JG. Noise reduction to decrease radiation dose and improve conspicuity of hepatic lesions at contrast-enhanced 80-kV hepatic CT using projection space denoising. AJR Am J Roentgenol. 2012 Feb; 198: (2)405-11.
    View PubMed
  72. Linte CA, Lang P, Rettmann ME, Cho DS, Holmes DR 3rd, Robb RA, Peters TM. Accuracy considerations in image-guided cardiac interventions: experience and lessons learned. Int J Comput Assist Radiol Surg. 2012 Jan; 7 (1):13-25 Epub 2011 June 14
    View PubMed
  73. Linte CA, Davenport KP, Cleary K, Peters C, Vosburgh KG, Edwards P, Jannin P, Peters TM, Holmes Iii DR, Robb RA. Augmented environments for minimally invasive therapy: implementation barriers from technology to practice. Stud Health Technol Inform. 2012; 173:263-9.
    View PubMed
  74. Rettmann ME, Holmes DR III, Gunawan MS, Ge X, Karwoski RA, Breen JF, Packer DL, Robb RA. Validation of geometric measurements of the left atrium and pulmonary veins for analysis of reverse structural remodeling following ablation therapy. Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 2012; 8317:831724.
  75. Holmes DR III, Wong KH. Progress in Biomedical Optics and Imaging - Proceedings of SPIE: Introduction. Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 2012; 8316:xxi-xxii.
  76. Linte CA, Augustine KE, Huddleston PM, Stans AA, Holmes DR III, Robb RA. Enhanced planning of interventions for spinal deformity correction using virtual modeling and visualization techniques. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 2012; 7264 LNCS:93-105.
  77. Linte CA, Moore JT, Chen ECS, Holmes DR III. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics): Preface. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 2012; 7264 LNCS:V-VI.
  78. Rettmann ME, Gunawan MS, Holmes DR III, Packer DL, Robb RA. Quantification of pulmonary vein morphology using centerline tracking. Proceedings - International Symposium on Biomedical Imaging. 2012:816-9.
  79. Miyabara Y, Camp J, Holmes D 3rd, Lahr B, Bailey K, Miller VM, Kearns AE. Coronary arterial calcification and thoracic spine mineral density in early menopause. Climacteric. 2011 Aug; 14(4):438-44. Epub 2011 Jan 25.
    View PubMed
  80. Liu J, Rettmann ME, Holmes DR 3rd, Duan H, Robb RA. A piecewise patch-to-model matching method for image-guided cardiac catheter ablation. Comput Med Imaging Graph. 2011 Jun; 35(4):324-32. Epub 2011 Mar 3
    View PubMed
  81. Apel A, Fletcher JG, Fidler JL, Hough DM, Yu L, Guimaraes LS, Bellemann ME, McCollough CH, Holmes DR, Eusemann CD. Pilot multi-reader study demonstrating potential for dose reduction in dual energy hepatic CT using non-linear blending of mixed kV image datasets. Eur Radiol. 2011 Mar; 21(3):644-52. Epub 2010 Sep 29.
    View PubMed
  82. Kwartowitz DM, Riti RE, Holmes DR III. Expansion and dissemination of "A standardized accuracy and precision assessment technique". Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 2011; 7964:79642B.
  83. Rettmann ME, Holmes DR III, Packer DL, Robb RA. Incorporating a Gaussian model at the catheter tip for improved registration of preoperative surface models. Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 2011; 7964:796411.
  84. Cameron BM, Rettmann ME, Holmes DR 3rd, Robb RA. Fast adaptation of pre-operative patient specific models to real-time intra-operative volumetric data streams. Stud Health Technol Inform. 2011; 163:99-104.
    View PubMed
  85. Guimaraes LS, Fletcher JG, Yu L, Huprich JE, Fidler JL, Manduca A, Ramirez-Giraldo JC, Holmes DR Jr, McCollough CH. Feasibility of dose reduction using novel denoising techniques for low kV (80 kV) CT enterography: optimization and validation. Acad Radiol. 2010 Oct; 17 (10):1203-10
    View PubMed
  86. Holmes D, Huprich J, Fidler J, Robb R, Fletcher J. Feasibility of developing interactive small bowel segmentation from MR enterography In Proceedings of MICCAI 2010 Workshop Virtual Colonoscopy and Abdominal Imaging.2010;()105-110.
  87. Hogan MC, Masyuk TV, Page LJ, Kubly VJ, Bergstralh EJ, Li X, Kim B, King BF, Glockner J, Holmes DR 3rd, Rossetti S, Harris PC, LaRusso NF, Torres VE. Randomized clinical trial of long-acting somatostatin for autosomal dominant polycystic kidney and liver disease. J Am Soc Nephrol. 2010 Jun; 21 (6):1052-61 Epub 2010 Apr 29
    View PubMed
  88. Hassinger JP, Dozois EJ, Holubar SD, Pawlina W, Pendlimari R, Fidler JL, Holmes DR, Robb RA. Virtual pelvic anatomy simulator improved medical student comprehension of pelvic anatomy The FASEB Journal.2010;24:(Supplement)825--3.
  89. Augustine KE, Stans AA, Morris JM, Huddleston PM, Matsumoto JM, Holmes III DR, Robb RA. Plan to procedure: combining 3D templating with rapid prototyping to enhance pedicle screw placement. Imaging. 2010.
  90. Kwartowitz DM, Rettmann ME, Holmes DR III, Robb RA. A novel technique for analysis of accuracy of magnetic tracking systems used in image guided surgery. SPIE Medical Imaging.2010;7625:
  91. Smelyanskiy M, Holmes D, Chhugani J, Larson A, Carmean DM, Hanson D, Dubey P, Augustine K, Kim D, Kyker A, Lee VW, Nguyen AD, Seiler L, Robb R. Mapping high-fidelity volume rendering for medical imaging to CPU, GPU and many-core architectures. IEEE Trans Vis Comput Graph. 2009 Nov-Dec; 15(6):1563-70.
    View PubMed
  92. Rettmann ME, Holmes DR 3rd, Cameron BM, Robb RA. An event-driven distributed processing architecture for image-guided cardiac ablation therapy. Comput Methods Programs Biomed. 2009 Aug; 95 (2):95-104 Epub 2009 Mar 13
    View PubMed
  93. Holmes DR III, Apel A, Fletcher JG, Guimaraes LS, Eusemann CE, Robb RA. Evaluating optimal CNR as a preset criteria for nonlinear moidal blending of dual energy CT data SPIE Medical Imaging 2009: Visualization, Imageg-Guided Procedures and Modeling.2009;726123:
  94. Holmes DR 3rd, Fletcher JG, Apel A, Huprich JE, Siddiki H, Hough DM, Schmidt B, Flohr TG, Robb R, McCollough C, Wittmer M, Eusemann C. Evaluation of non-linear blending in dual-energy computed tomography. Eur J Radiol. 2008 Dec; 68 (3):409-13 Epub 2008 Nov 05
    View PubMed
  95. Konig A, Margolis MP, Virmani R, Holmes D, Klauss V, Medscape. Technology insight: in vivo coronary plaque classification by intravascular ultrasonography radiofrequency analysis. Nat Clin Pract Cardiovasc Med. 2008 Apr; 5(4):219-29. Epub 2008 Feb 26.
    View PubMed
  96. Eusemann C, Holmes DR III, Schmidt B, Flohr TG, Robb RA, McCollough C. Dual energy CT: How to best blend both energies in one fused image Proc. SPIE Medical Imaging 2008: Visualilzation, Image-guided Procedures and Modeling.2008;6918:
  97. Karwoski RA, Bartholmai B, Zavaletta VA, Holmes D, Robb RA. Processing of CT Images for Analysis of Diffuse Lung Disease in the Lung Tissue Research Consortium. Progress in Biomedical Optics and Imaging - Proceedings of SPIE 6916, art. no. 691614.. 2008;
  98. Augustine KE, Huddleston PM, Holmes DR III, Shridharani SM, Robb RA. Optimization of spine surgery planning with 3D image templating tools Medical Imaging.2008;6918:
  99. Rettmann ME, Holmes DR III, Cameron BM, Robb RA. Interactive Visualization of Cardiac Anatomy in Catheter-Based Ablation Therapy. Medical Image Computing and Computer-Assisted Interventions (MICCAI) workshop on Interaction in Medical Image Analysis and Visualization. 2007 Nov.
  100. Eusemann CD, Sammons BE, Holmes DR 3rd, Brady TJ, Erenburg I, Toneguzzo F. Academic technology transfer and radiology: a strong partnership for the future. Acad Radiol. 2007 Nov; 14(11):1289-95.
    View PubMed
  101. Holmes DR III, Robb RA. Data, Data Everywhere, nor an Image to Read. Insight Software Journal. 2007 Oct.
  102. Holmes DR, Davis BJ, Hangiandreou NJ, Kinnick RR, Wilson TM, Mynderse LA, Robb RA. Design and testing of a custom transurethral ultrasound device with rapid 3D reconstruction using a rotational scanner. Brachytherapy. 2007 Apr-Jun; 6(2):94.
  103. Bartholmai B, Karwoski RA, Zavaletta VA, Robb RA, Holmes DR III. The lung tissue research consortium: an extensive open database containing histological, clinical, and radiological data to study chronic lung disease The Insight Journal – 2006 MICCAI Open Science Workshop. http://hdl.handle.net/1926/221.2006;1926()221.
  104. Holmes DR III, Rettmann ME, Cameron BM, Camp JJ, Robb RA. Virtual cardioscopy: Interactive endocardial visualization to guide RF cardiac ablation. Proc SPIE-Medical Imaging. 2006 Feb 11-16.
  105. Rettmann ME, Holmes DR 3rd, Su Y, Cameron BM, Camp JJ, Packer DL, Robb RA. An integrated system for real-time image guided cardiac catheter ablation. Stud Health Technol Inform. 2006; 119:455-60.
    View PubMed
  106. Holmes DR III, Robb RA. Volumetric CT measurement of the ischial tuberosities for designing analytical models of decubitus uclers. Proc SPIE -- Medical Imaging 2005, San Diego, California. 2006; Feb 11-16.
  107. Rettmann ME, Holmes DR III, Su Y, Kolasa MW, Packer DL, Robb RA. Evaluation of global versus piecewise registration using a ground truth canine model. Proc IEEE -- International Symposium on Biomedical Imaging: From Nano to Macro, Arlington, Virginia. 2006; April 6-9.
  108. Augustine KE, Holmes DR III, Hanson DP, Robb RA. Comprehensive, powerful, efficient intuitive: A new framework for clinical imaging applications. Proc SPIE -- Medical Imaging. 2006 San Diego, California. 2006; Feb 11-16.
  109. Su Y, Holmes DR III, Rettmann ME, Robb RA. A piecewise function-to-structural registration algorithm for image guided cardiac catheter ablation. Proc SPIE -- Medical Imaging. 2006, San Diego, California. 2006; Feb 11-16.
  110. Redwood A, Holmes DR III, Yang E, Lerman A, Robb RA. Using ChromaFlo intra-vascular ultrasound (IVUS) to analyze adventitial vasa vasorum distribution: Considerations and recommendations. Proc SPIE -- Medical Imaging. 2006, San Diego, California. 2006 Feb; 11-16.
  111. Rettmann ME, Holmes DR III, Su Y, Cameron BM, Packer DL, Robb RA. An Integrated system for real-time image guided cardiac catheter ablation. Medicine Meets Virtual Reality (MMVR). 2006 Jan.
  112. Bliley KE, Schwab DJ, Holmes DR, Kane PH, Levine JA, Daniel ES, Gilbert BK. Design of a compact system Using a MEMS Accelerometer to Measure Body Posture and Ambulation. 19th IEEE Symposium on Computer-Based Medical Systems (CBMS’06) 19th IEEE Symposium on Computer-Based Medical Systems (CBMS’06).2006;335-340.
  113. Haider CR, Bartholmai BJ, Holmes DR, Camp JJ, Robb RA. Quantitative characterization of lung disease. Comput Med Imaging Graph. 2005 Oct; 29 (7):555-63 Epub 2005 Sept 06
    View PubMed
  114. Holmes DR III, Workman EL, Robb RA. The NLM-Mayo image collection: Common access to uncommon data. Medical Image Computing & Computer Assisted Intervention 2005, Palm Springs, California, IN: ISC/NA-MIC/MICCAI Workshop on Open Source Software.2005;
  115. Bliley KE, Holmes DR III, Kane PH, Foster RC, Levine JA, Daniel ES, Gilbert BK. A miniaturized low power personal motion analysis logger utilizing MEMS accelerometers and low power microcontroller. Proceedings of the 3rd Annual International IEEE EMBS Special Topic Conference on Microtechnologies in Medicine and Biology 2005. 2005 May; 92-3.
  116. Haider CR, Bartholmai BJ, Holmes DR, Camp JJ, Robb Ra. Parametric modeling for quantitative analysis of pulmonary structure to function relationships Proc. SPIE 5744, Medical Imaging 2005: Visualization, Image-Guided Procedures, and Display.2005;5744()184.
  117. Holmes DR III, Welch EB, Philpott RA, Coker JD, Schaefer TM, Gilbert BK, Daniel ES. Asynchronous spread spectrum communication for a micro-miniature transponder: implementation and test results. Proceedings of SPIE, The International Society for Optical Engineering. 2005 Mar; 5819:231-6.
  118. Welch B, Holmes DR III, Coker JD, Schaefer TM, Gilbert BK, Daniel ES. Asynchronous spread spectrum communication paradigm for use in low-power applications: description and simulation results. Proceedings of SPIE, The International Society for Optical Engineering. 2005 Mar; 5819:222-30.
  119. Techentin RW, Holmes DR, Gilbert BK, Daniel ES. Real-time code distribution on a heterogeneous network for laboratory equipment control. Proceedings of the Eleventh Annual Tcl/Tk Conference. 2004 Oct:11-7.
  120. Augustine KE, Holmes DR, Robb RA. ITK and ANALYZE: a synergistic intergration Proc. SPIE 5367, Medical Imaging 2004: Visualization, Image-Guided Procedures, and Display.2004;5367:6.
  121. Holmes DR, Robb RA. Improved automated brachytherapy seed localization in trans-urethral ultrasound data Proc. SPIE 5367, Medical Imaging 2004: Visualization, Image-Guided Procedures, and Display, .2004;5637:353-360.
  122. Holmes DR 3rd, Davis BJ, Bruce CJ, Robb RA. 3D visualization, analysis, and treatment of the prostate using trans-urethral ultrasound. Comput Med Imaging Graph. 2003 Sep-Oct; 27 (5):339-49
    View PubMed
  123. Holmes DR III, Davis BJ, Robb RA. Trans-urethral ultrasound: A new tool for diagnostic and therapeutic imaging in prostate cancer. Proc Of Medical Image Computing and Computer-Assisted Intervention - MICCAI 2001 Utrecht The Netherlands. 2001; 2208:1243-4.
  124. Holmes DR 3rd, Davis BJ, Robb RA. 3D localization of implanted radioactive sources in the prostate using trans-urethral ultrasound. Stud Health Technol Inform. 2001; 81:199-205.
    View PubMed
  125. Holmes DR 3rd, Robb R. Trans-urethral ultrasound (TUUS) imaging for visualization and analysis of the prostate and associated tissues. Stud Health Technol Inform. 2000; 70:126-32.
    View PubMed
  126. Holmes DR III, Robb RA. Trans-urethral ultrasound (TUUS) imaging for visualization and analysis of the prostate and associated tissues. Proc. SPIE - Medical Imaging. 2000: Image Display and Visualization, 2000; 3976:22-7.
  127. Holmes DR III, Robb RA. Quantitative image analysis of histological sections of coronary arteries. Proc. SPIE - Medical Imaging. 2000: Image Processing, 2000; 3979:1303-8.
  128. Holmes DR III, Robb RA. 3D trans-urethral ultrasound: a new view of the prostate gland. Proceedings of Computer Assisted Radiology and Surgery (CARS. 2000), Eds.: H.U. Lemke, M.W. Vannier, K. Inamura, A.G. Farnham, K. Doi, Elsevier Science, Amsterdam, 2000; 1214:1034.
  129. Holmes D III, Robb RA. Processing, segmentation, and visualization of pre- and post-stent coronary arteries using intra-vascular ultrasound. Proc. SPIE Medical Imaging '98 San Diego, California. 1998 Feb; 3335:72-82.
  130. Holmes DR Jr, Holmes DR Jr, Bell MR, Holmes DR 3rd, Holmes DR 3rd, Berger PB, Bresnahan JF, Hammes LN, Grill DE, Garratt KN. Interventional cardiology and intracoronary stents--a changing practice: approved vs. nonapproved indications. Cathet Cardiovasc Diagn. 1997 Feb; 40 (2):133-8
    View PubMed
  131. Holmes DR III, Camp JJ, Robb RA. Evaluation of search strategies and cost functions in optimizing voxel-based image registration. Proc SPIE - The International Society for Optical Engineering pp 554-562.1997;vol. 3031:0.